Graphics from genescan and blast2p are here.
Translation of the three reading frames is here.
Output from Genemachine is here.

Peptide predicted by GENSCANW

>51028.t00050,|GENSCAN_predicted_peptide_1|526_aa
MPAFYGGKLTTFEDDEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRL
EGDSATIQVYEETAGLTVNDPVLRTHKRPLKTIARISGDVYIPRVEGDTITGGDLYADTV
IELEFQGIKKSYTMLQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVVYV
GCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIA
EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKC
LGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISY
SKYSTALESFYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKL
LREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERAAGMDGQKITYTLIKHR
LGDLFYRLVSQKFEDPAEGEDTLVEKFKKLYDDLNAGFRALEDETX

Pairwise Alignment between predicted peptide sequence and cDNA encosed protein:

ALIGN calculates a global alignment of two sequences
 version 2.0uPlease cite: Myers and Miller, CABIOS (1989) 4:11-17
51028.t00050,_GENSCAN_predicted_peptide_1_526_aa 526 aa vs.
GENPEPT:2266990 623 aa
scoring matrix: BLOSUM50, gap penalties: -12/-2
84.3% identity; Global alignment score: 3194
 
 
 10  20 30 40 50 60
51028.t00050 MPAFYGGKLTTFEDDEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRL
 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
GENPEPT:2266 MPAFYGGKLTTFEDDEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRL
 10 20 30 40 50 60
 
 70 80 90 100 
51028.t00050 EGDSATIQVYEETAGLTVNDPVLRTHK-------------------RPLKTIARISGDVY
 ::::::::::::::::::::::::::: ::::::::::::::
GENPEPT:2266 EGDSATIQVYEETAGLTVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIARISGDVY
 70 80 90 100 110 120
 
 110 
51028.t00050 IPR--------------------VEGDTITGGDLYA------------------------
 ::: ::::::::::::: 
GENPEPT:2266 IPRGVSVPALDKDCLWEFQPNKFVEGDTITGGDLYATVFENTLMNHLVALPPDAMGKITY
 130 140 150 160 170 180
 
 120 130 140 
51028.t00050 ----------DTVIELEFQGIKKSYTMLQ------------------------RVLDALF
 ::::::::::::::::::: :::::::
GENPEPT:2266 IAPAGQYSLKDTVIELEFQGIKKSYTMLQSWPVRTPRPVASKLAADTPLLTGQRVLDALF
 190 200 210 220 230 240
 
  150 160 170 180 190 200 
51028.t00050 PSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTL
 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
GENPEPT:2266 PSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVVYVGCGERGNEMAEVLMDFPQLTMTL
 250 260 270 280 290 300
 
 210 220 230 240 250 260 
51028.t00050 PDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEA
  ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
GENPEPT:2266 PDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEA
 310 320 330 340 350 360
 
 270 280 290 300 310 320 
51028.t00050 LREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDF
 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
GENPEPT:2266 LREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDF
 370 380 390 400 410 420
 
 330 340 350 360 370 380 
51028.t00050 SDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDPDFINIRT
 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
GENPEPT:2266 SDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDPDFINIRT
 430 440 450 460 470 480
 
 390 400 410  420 430 440 
51028.t00050 KAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKS
 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
GENPEPT:2266 KAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKS
  490 500 510 520 530 540
 
 450 460 470 480 490 500 
51028.t00050 VWMMRNIIHFYNLANQAVERAAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTL
 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
GENPEPT:2266 VWMMRNIIHFYNLANQAVERAAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTL
 550 560 570 580 590 600
 
 510 520 
51028.t00050 VEKFKKLYDDLNAGFRALEDETX
 :::::::::::::::::::::: 
GENPEPT:2266 VEKFKKLYDDLNAGFRALEDETR

610 620

Exons that were correctly predicted by Genscan are in red

Exons that were missed by Genscan are in purple

== Linear Map of Sequence:

 
 1 agtttttgaatctctgattgctgagaaaatgccggcgttttacggaggaaagcttacgac 60 
 tcaaaaacttagagactaacgactcttttacggccgcaaaatgcctcctttcgaatgctg 
 ^ * ^ * ^ * ^ * ^ * ^ *  
1 S F * I S D C * E N A G V L R R K A Y D 
2 V F E S L I A E K M P A F Y G G K L T T  
3 F L N L * L L R K C R R F T E E S L R P 
  
 
 
 61 cttcgaggacgatgagaaggagagcgagtatggttacgttcgtaaggtattatcctgttt 120 
 gaagctcctgctactcttcctctcgctcataccaatgcaagcattccataataggacaaa 
 ^  * ^ * ^ * ^ * ^ * ^ * 
1 L R G R * E G E R V W L R S * G I I L F 
2 F E D D E K E S E Y G Y V R K V L S C F 
3 S R T M R R  R A S M V T F V R Y Y P V S 
 
 
 
 121 cgttcgatctggtttcaatttgtttttttttctgttttgcgatgttagtttttggtgatg 180 
 gcaagctagaccaaagttaaacaaaaaaaaagacaaaacgctacaatcaaaaaccactac 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 R S I W F Q F V F F S V L R C * F L V M 
2 V R S G F N L F F F L F C D V S F W * W 
3 F D L V S I C F F F C F A M L V F G D G 
 
 
 
 181 gatagatgaaatagttgatctgcttaccaggtaagattggtgggatagctagatttgatc 240 
 ctatctactttatcaactagacgaatggtccattctaaccaccctatcgatctaaactag 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 D R * N S * S A Y Q V R L V G * L D L I 
2 I D E I V D L L T R * D W W D S * I * S 
3 * M K * L I C L P G K I G G I A R F D L 
  
 
 
 241 tgatagttatcagtgattgaatcggttgattccgcgttggttcagtaacctcgtctttga 300 
 actatcaatagtcactaacttagccaactaaggcgcaaccaagtcattggagcagaaact 
 ^ * ^ * ^ * ^ * ^ * ^ *  
1 * * L S V I E S V D S A L V Q * P R L * 
2 D S Y Q * L N R L I P R W F S N L V F E 
3 I V I S D * I G * F R V G S V T S S L N 
 
 
  301 atttctgatctgatctgatagttctcagtgatttgacattttcttttatgggatgcaggt 360 
 taaagactagactagactatcaagagtcactaaactgtaaaagaaaataccctacgtcca 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 I S D L I * * F S V I * H F L L W D A G 
2 F L I * S D S S Q * F D I F F Y G M Q V  
3 F * S D L I V L S D L T F S F M G C R F 
  
 
 
 361 ttcaggtcctgttgttgttgccgatggtatggccggtgctgctatgtatgagttagtgcg 420 
 aagtccaggacaacaacaacggctaccataccggccacgacgatacatactcaatcacgc 
 ^ * ^ * ^  * ^ * ^ * ^ * 
1 F R S C C C C R W Y G R C C Y V * V S A 
2 S G P V V V A D G M A G A A M Y E L V R  
3 Q V L L L L P M V W P V L L C M S * C V 
 
 
 421 tgttggtcatgataatttgattggtgaaatcatccgtcttgaaggagattctgccaccat  480 
 acaaccagtactattaaactaaccactttagtaggcagaacttcctctaagacggtggta 
 ^ * ^ * ^ * ^ * ^ *  ^ * 
1 C W S * * F D W * N H P S * R R F C H H 
2 V G H D N L I G E I I R L E G D S A T I 
3 L V M I I * L V K S S V L K E I L P P S  
 
 
 481 ccaaggtttgtttcttctattgtgcttcctagtgtaatttactttacggcatcttatgtg 540 
 ggttccaaacaaagaagataacacgaaggatcacattaaatgaaatgccgtagaatacac 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1  P R F V S S I V L P S V I Y F T A S Y V 
2 Q G L F L L L C F L V * F T L R H L M * 
3 K V C F F Y C A S * C N L L Y G I L C D 
  
 MnlI 
 
 
 541 acctctgtcgaagtaagatatcttaactgatatttggcaacttccttttgatcagtttac 600 
 tggagacagcttcattctatagaattgactataaaccgttgaaggaaaactagtcaaatg 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 T S V E V R Y L N * Y L A T S F * S V Y  
2 P L S K * D I L T D I W Q L P F D Q F T 
3 L C R S K I S * L I F G N F L L I S L R 
 
 
 601 gaggaaacagctggattgacagttaatgatcccgttcttcgaacacacaaggttcgcgag 660 
 ctcctttgtcgacctaactgtcaattactagggcaagaagcttgtgtgttccaagcgctc 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 E E T A G L T V N D P V L R T H K V R E 
2 R K Q L D * Q L M I P F F E H T R F A S 
3 G N S W I D S * * S R S S N T Q G S R V 
 
 
 
 661 ttatttatcttggttttttctagtgttgttcatctgcagctaacatataatttgtcctga 720 
 aataaatagaaccaaaaaagatcacaacaagtagacgtcgattgtatattaaacaggact 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 L F I L V F S S V V H L Q L T Y N L S * 
2  Y L S W F F L V L F I C S * H I I C P E 
3 I Y L G F F * C C S S A A N I * F V L N 
 
 
 
 721 atttactacagccactttctgtggagctcgggccaggaatattgggaaatatctttgatg  780 
 taaatgatgtcggtgaaagacacctcgagcccggtccttataaccctttatagaaactac 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 I Y Y S H F L W S S G Q E Y W E I S L M 
2 F T T A T F C G A R A R N I G K Y L * W 
3 L L Q P L S V E L G P G I L G N I F D G 
  
 
 
 781 gaattcaggttcagttggatttataatcttgctagacatgattttttttacttttatgat 840 
 cttaagtccaagtcaacctaaatattagaacgatctgtactaaaaaaaatgaaaatacta 
 ^ * ^ * ^ * ^  * ^ * ^ * 
1 E F R F S W I Y N L A R H D F F Y F Y D 
2 N S G S V G F I I L L D M I F F T F M I 
3 I Q V Q L D L * S C * T * F F L L L * F 
 
 
 
 841 tcgttttatgtggcttcttacgattctttggtttcatttctttaaatgtcacagaggcct 900 
 agcaaaatacaccgaagaatgctaagaaaccaaagtaaagaaatttacagtgtctccgga  
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 S F Y V A S Y D S L V S F L * M S Q R P 
2 R F M W L L T I L W F H F F K C H R G L 
3  V L C G F L R F F G F I S L N V T E A F 
 
 
 
 901 ttgaagactattgcaagaatatccggtgatgtgtacattcctcggggtgtgtctgttcca 960 
 aacttctgataacgttcttataggccactacacatgtaaggagccccacacagacaaggt 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 L K T I A R I S G D V Y I P R G V S V P 
2 * R L L Q E Y P V M C T F L G V C L F Q 
3 E D Y C K N I R * C V H S S G C V C S S 
 
 
 961 gctcttgacaaagattgtctttgggagttccagcccaataaatttggtaatgtggtttac  1020 
 cgagaactgtttctaacagaaaccctcaaggtcgggttatttaaaccattacaccaaatg 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 A L D K D C L W E F Q P N K F G N V V Y 
2 L L T K I V F G S S S P I N L V M W F T 
3 S * Q R L S L G V P A Q * I W * C G L L 
 
 
 
 1021 tccatatgcctgtctatggaagtgttcatttggttttaatcttgatggtcaattgaattc 1080 
 aggtatacggacagataccttcacaagtaaaccaaaattagaactaccagttaacttaag 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 S I C L S M E V F I W F * S * W S I E F  
2 P Y A C L W K C S F G F N L D G Q L N S 
3 H M P V Y G S V H L V L I L M V N * I R 
 
 
 
  1081 gttttgtttgcagtcgagggagacacaataactggtggtgacttgtatgctgtaagttta 1140 
 caaaacaaacgtcagctccctctgtgttattgaccaccactgaacatacgacattcaaat 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 V L F A V E G D T I T G G D L Y A  V S L 
2 F C L Q S R E T Q * L V V T C M L * V Y 
3 F V C S R G R H N N W W * L V C C K F I 
 
 
 1141 ttggtctcctctttaatctgcttttgacaagggaatctatttacacagttaccgtggtgt 1200 
 aaccagaggagaaattagacgaaaactgttcccttagataaatgtgtcaatggcaccaca 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 L V S S L I C F * Q G N L F T Q L P W C 
2 W S P L * S A F D K G I Y L H S Y R G V 
3 G L L F N L L L T R E S I Y T V T V V F 
  
 
 
 1201 ttcccttgtttacactgggaatagttttttctgaaagtcaaattaaactttggaatgcag 1260 
 aagggaacaaatgtgacccttatcaaaaaagactttcagtttaatttgaaaccttacgtc 
 ^ * ^ * ^ * ^ * ^ *  ^ * 
1 F P C L H W E * F F L K V K L N F G M Q 
2 S L V Y T G N S F F * K S N * T L E C R 
3 P L F T L G I V F S E S Q I K L W N A D  
 
 
 1261 actgtctttgagaacactttgatgaatcacctcgttgcccttcctccggatgccatgggg 1320 
 tgacagaaactcttgtgaaactacttagtggagcaacgggaaggaggcctacggtacccc 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1  T V F E N T L M N H L V A L P P D A M G 
2 L S L R T L * * I T S L P F L R M P W G 
3 C L * E H F D E S P R C P S S G C H G E 
  
 
 
 1321 aagatcacttacattgctccagctggtcaatattcgcttaaggtttgactttaagtttcc 1380 
 ttctagtgaatgtaacgaggtcgaccagttataagcgaattccaaactgaaattcaaagg 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 K I T Y I A P A G Q Y S L K  V * L * V S 
2 R S L T L L Q L V N I R L R F D F K F P 
3 D H L H C S S W S I F A * G L T L S F P 
 
 
 
 1381 ctcaaacagttatgaataaatacgtttcaaactttttcttccttgatttctttgaattca 1440 
 gagtttgtcaatacttatttatgcaaagtttgaaaaagaaggaactaaagaaacttaagt 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 L K Q L * I N T F Q T F S S L I S L N S 
2 S N S Y E * I R F K L F L P * F L * I Q 
3 Q T V M N K Y V S N F F F L D F F E F N 
 
 
 
 1441 acgtttgagttaatatatggctaacttgatcaattggtaatcacttcctgttgtagatca 1500 
 tgcaaactcaattatataccgattgaactagttaaccattagtgaaggacaacatctagt 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 T F E L I Y G * L D Q L V I T S C C R S 
2  R L S * Y M A N L I N W * S L P V V D H 
3 V * V N I W L T * S I G N H F L L * I M 
 
 
 
 1501 tgtttggcttgttgctaataattgtttgtcggtgattttcatttctcaggataccgtgat 1560 
 acaaaccgaacaacgattattaacaaacagccactaaaagtaaagagtcctatggcacta 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 C L A C C * * L F V G D F H F S G Y R D 
2 V W L V A N N C L S V I F I S Q D T V I 
3 F G L L L I I V C R * F S F L R I P * * 
  
 
 
 1561 agagcttgaattccaggggatcaagaaatcttacaccatgcttcaggtttgcatgtatct 1620 
 tctcgaacttaaggtcccctagttctttagaatgtggtacgaagtccaaacgtacataga 
 ^ * ^ * ^ * ^  * ^ * ^ * 
1 R A * I P G D Q E I L H H A S G L H V S 
2 E L E F Q G I K K S Y T M L Q V C M Y L 
3 S L N S R G S R N L T P C F R F A C I F 
 
 
 
 1621 ttaatcttcctacttgcaaacgtaaattttaagctatttggttcactctgttaaattggt 1680 
 aattagaaggatgaacgtttgcatttaaaattcgataaaccaagtgagacaatttaacca  
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 L I F L L A N V N F K L F G S L C * I G 
2 * S S Y L Q T * I L S Y L V H S V K L V 
3  N L P T C K R K F * A I W F T L L N W F 
 
 
 
 1681 ttggttgatatatgtcagagctggcctgtacgtacgcctaggccagttgcatcaaagctt 1740 
 aaccaactatatacagtctcgaccggacatgcatgcggatccggtcaacgtagtttcgaa 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 L V D I C Q S W P V R T P R P V A S K L 
2 W L I Y V R A G L Y V R L G Q L H Q S L 
3 G * Y M S E L A C T Y A * A S C I K A C 
 
 
 
 1741 gctgccgatactcctctacttacggggcaggtgattactcgattaattcttcttacagtg 1800 
 cgacggctatgaggagatgaatgccccgtccactaatgagctaattaagaagaatgtcac 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 A A D T P L L T G Q V I T R  L I L L T V 
2 L P I L L Y L R G R * L L D * F F L Q W 
3 C R Y S S T Y G A G D Y S I N S S Y S G 
 
 
 1801 gtgatagtcatttgaatacatgtgttgctgattgctttcttttcctgttgtcagcgtgtt 1860 
 cactatcagtaaacttatgtacacaacgactaacgaaagaaaaggacaacagtcgcacaa 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 V I V I * I H V L L I A F F S C C Q R V  
2 * * S F E Y M C C * L L S F P V V S V F 
3 D S H L N T C V A D C F L F L L S A C S 
 
 
 1861 cttgatgcccttttcccttctgttcttggtggaacctgtgccattcctggtgcttttggc 1920 
  gaactacgggaaaagggaagacaagaaccaccttggacacggtaaggaccacgaaaaccg 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 L D A L F P S V L G G T C A I P G A F G 
2 L M P F S L L F L V E P V P F L V L L A 
3 * C P F P F C S W W N L C H S W C F W L 
 
 
 
 1921 tgtgggaaaactgttatcagtcaggcactttccaaggtaccttgtgacactctctggttt 1980 
 acacccttttgacaatagtcagtccgtgaaaggttccatggaacactgtgagagaccaaa 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 C G K T V I S Q A L S K V P C D T L W F 
2 V G K L L S V R H F P R Y L V T L S G F 
3 W E N C Y Q S G T F Q G T L * H S L V L 
  
 
 
 1981 tgttccatttaattactggatagattgaatttccaaagctaactttttcttatttacata 2040 
 acaaggtaaattaatgacctatctaacttaaaggtttcgattgaaaaagaataaatgtat 
 ^ * ^ * ^ * ^  * ^ * ^ * 
1 C S I * L L D R L N F Q S * L F L I Y I 
2 V P F N Y W I D * I S K A N F F L F T * 
3 F H L I T G * I E F P K L T F S Y L H S 
 
 
 
 2041 gtactccaactctgatgctgttgtgtatgttggttgtggagagagaggaaatgaaatggc 2100 
 catgaggttgagactacgacaacacatacaaccaacacctctctctcctttactttaccg  
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 V L Q L * C C C V C W L W R E R K * N G 
2 Y S N S D A V V Y V G C G E R G N E M A 
3  T P T L M L L C M L V V E R E E M K W L 
 
 
 
 2101 tgaggtatatctcttctcattctaaatttgcatattgttcatacaaatcggacatttgat 2160 
 actccatatagagaagagtaagatttaaacgtataacaagtatgtttagcctgtaaacta 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 * G I S L L I L N L H I V H T N R T F D 
2 E V Y L F S F * I C I L F I Q I G H L I 
3 R Y I S S H S K F A Y C S Y K S D I * S 
 
 
 
 2161 ctgattgtttctcataaattaggttcttatggacttcccacaattgacaatgacgttgcc 2220 
 gactaacaaagagtatttaatccaagaatacctgaagggtgttaactgttactgcaacgg 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 L I V S H K L G S Y G L P T I D N D V A 
2 * L F L I N * V L M D F P Q L T M T L P 
3 D C F S * I R F L W T S H N * Q * R C L 
  
 
 
 2221 tgatggccgtgaggaatctgtcatgaaacgtaccacacttgttgctaacacctctaacat 2280 
 actaccggcactccttagacagtactttgcatggtgtgaacaacgattgtggagattgta 
 ^ * ^ * ^ * ^ * ^ * ^ *  
1 * W P * G I C H E T Y H T C C * H L * H 
2 D G R E E S V M K R T T L V A N T S N M 
3 M A V R N L S * N V P H L L L T P L T C 
  
 
 
 2281 gcctgtggctgctcgtgaagcctcaatttacacaggtaatgttcaggcacacagatttaa 2340 
 cggacaccgacgagcacttcggagttaaatgtgtccattacaagtccgtgtgtctaaatt 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 A C G C S * S L N L H R * C S G T Q I * 
2 P V A A R E A S I Y T G N V Q A H R F N 
3 L W L L V K P Q F T Q V M F R H T D L I 
 
 
 
 2341 tagttattgatgaatcccattgcctatgctcattttttttttttttttttaatgtgaatt 2400 
 atcaataactacttagggtaacggatacgagtaaaaaaaaaaaaaaaaaattacacttaa 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 * L L M N P I A Y A H F F F F F L M * I 
2 S Y * * I P L P M L I F F F F F * C E F 
3 V I D E S H C L C S F F F F F F N V N S 
 
 
 
 2401 ccaggaatcacaatcgctgaatattttagagatatgggctacaatgttagtatgatggca 2460 
 ggtccttagtgttagcgacttataaaatctctatacccgatgttacaatcatactaccgt 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 P G I T I A E Y F R D M G Y N V S M M A  
2 Q E S Q S L N I L E I W A T M L V * W Q 
3 R N H N R * I F * R Y G L Q C * Y D G R 
 
 
 2461 gactcaacttcccgttgggcagaagcattaagagaaatttcaggacggctggtaatctta 2520 
  ctgagttgaagggcaacccgtcttcgtaattctctttaaagtcctgccgaccattagaat 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 D S T S R W A E A L R E I S G R L V I L 
2 T Q L P V G Q K H * E K F Q D G W * S Y 
3 L N F P L G R S I K R N F R T A G N L M 
 
 
 
 2521 tgcgtttcacttttgctatatggatgttcgtgttgtcctcatctcacttttctttttctc 2580 
 acgcaaagtgaaaacgatatacctacaagcacaacaggagtagagtgaaaagaaaaagag 
 ^ * ^ * ^ * ^ * ^ * ^ * 
1 C V S L L L Y G C S C  C P H L T F L F L 
2 A F H F C Y M D V R V V L I S L F F F S 
3 R F T F A I W M F V L S S S H F S F S Q 
 
Translation truncated 

 

Genscan output, with  missed exons added

blast2p alignment of cDNA encoded (x) and predicted peptide sequence.

Output from genemachine:
(Genemachine at http://genome.nhgri.nih.gov/genemachine/ provides the output as an asn - file. One way to read it is to load the file into SEQUIN, a program available at the NCBI).

Summary printed from SEQUIN: